Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid stress chaperone hdeb | C4M78_15975 | Not Available | Negative | 3111902 - 3112228 | 12043.5 |
| acid-resistance protein | C4M78_15980 | Not Available | Negative | 3112344 - 3112676 | 11831.2 |
| acid-resistance protein | C4M78_15985 | Not Available | Positive | 3112931 - 3113503 | 20904.7 |
| transcriptional regulator gade | C4M78_15990 | Not Available | Positive | 3114301 - 3114828 | 20600.6 |
| hypothetical protein | C4M78_15995 | Not Available | Negative | 3114778 - 3115107 | 11627.0 |
| efflux rnd transporter periplasmic adaptor subunit | C4M78_16000 | Not Available | Positive | 3115167 - 3116321 | 41036.8 |
| multidrug efflux rnd transporter permease subunit | C4M78_16005 | Not Available | Positive | 3116346 - 3119459 | 111552.0 |
| hypothetical protein | C4M78_16010 | Not Available | Negative | 3119396 - 3119677 | 10523.2 |
| arac family transcriptional regulator | C4M78_16015 | Not Available | Negative | 3119822 - 3120550 | 28002.0 |
| arac family transcriptional regulator | C4M78_16020 | Not Available | Negative | 3120919 - 3121743 | 31257.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





