Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin-degrading factor | C4M78_15920 | Not Available | Negative | 3102187 - 3103215 | 38638.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | C4M78_15925 | Not Available | Negative | 3103264 - 3105246 | 72491.0 |
| hypothetical protein | C4M78_15930 | Not Available | Positive | 3105152 - 3105343 | 7010.53 |
| hemin abc transporter substrate-binding protein | C4M78_15940 | Not Available | Positive | 3105852 - 3106844 | 36131.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | C4M78_15945 | Not Available | Positive | 3106864 - 3108201 | 49588.2 |
| heme utilization cystosolic carrier protein hutx | C4M78_15950 | Not Available | Positive | 3108214 - 3108708 | 18275.8 |
| anaerobilin reductase | C4M78_15955 | Not Available | Positive | 3108708 - 3109331 | 21810.1 |
| iron abc transporter permease | C4M78_15960 | Not Available | Positive | 3109416 - 3110372 | 34014.1 |
| heme abc transporter atp-binding protein | C4M78_15965 | Not Available | Positive | 3110369 - 3111139 | 28855.9 |
| mgtc/sapb family protein | C4M78_15970 | Not Available | Negative | 3111191 - 3111838 | 23211.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





