Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | C4M78_15095 | Not Available | Positive | 2934448 - 2935821 | 49998.5 |
| duf4223 domain-containing protein | C4M78_15100 | Not Available | Positive | 2936072 - 2936239 | 5819.16 |
| aminotransferase class v-fold plp-dependent enzyme | C4M78_15105 | Not Available | Negative | 2936346 - 2937431 | 38526.7 |
| hypothetical protein | C4M78_15110 | Not Available | Negative | 2937443 - 2938747 | 46475.2 |
| duf2620 domain-containing protein | C4M78_15115 | Not Available | Negative | 2938759 - 2939112 | 12479.5 |
| phosphotriesterase-related protein | C4M78_15120 | Not Available | Negative | 2939123 - 2940001 | 32785.2 |
| phosphopentomutase | C4M78_15125 | Not Available | Negative | 2939998 - 2941224 | 44544.2 |
| yhfx family plp-dependent enzyme | C4M78_15130 | Not Available | Negative | 2941224 - 2942387 | 42366.9 |
| prd domain-containing protein | C4M78_15135 | Not Available | Negative | 2942471 - 2942833 | 13557.5 |
| hypothetical protein | C4M78_15140 | Not Available | Negative | 2942850 - 2943755 | 33542.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





