Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan permease | C4M78_14835 | Not Available | Positive | 2885879 - 2887126 | 45227.3 |
| multidrug resistance protein mdtl | C4M78_14840 | Not Available | Positive | 2887259 - 2888434 | 41492.2 |
| hth-type transcriptional regulator yidz | C4M78_14845 | Not Available | Positive | 2888409 - 2889368 | 36946.0 |
| hypothetical protein | C4M78_14850 | Not Available | Positive | 2889525 - 2890274 | 27648.2 |
| chromate reductase | C4M78_14855 | Not Available | Positive | 2890296 - 2890862 | 20362.8 |
| ncs2 family permease | C4M78_14860 | Not Available | Negative | 2890916 - 2892253 | 46845.8 |
| 6-phosphogluconate phosphatase | C4M78_14865 | Not Available | Positive | 2892420 - 2893085 | 24882.0 |
| type iii effector | C4M78_14870 | Not Available | Negative | 2893222 - 2895630 | 93255.9 |
| type iii effector protein | C4M78_14875 | Not Available | Positive | 2895931 - 2897118 | 46089.8 |
| hypothetical protein | C4M78_14880 | Not Available | Negative | 2897257 - 2897397 | 5238.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





