Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C4M78_14735 | Not Available | Negative | 2866178 - 2867470 | 47079.4 |
| d-galactonate dehydratase 2 | C4M78_14740 | Not Available | Negative | 2867590 - 2868738 | 42525.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C4M78_14745 | Not Available | Negative | 2868735 - 2869352 | 21458.9 |
| 2-oxo-3-deoxygalactonate kinase | C4M78_14750 | Not Available | Negative | 2869336 - 2870214 | 31400.4 |
| transcriptional regulator | C4M78_14755 | Not Available | Negative | 2870211 - 2870900 | 26081.1 |
| hypothetical protein | C4M78_14760 | Not Available | Positive | 2871178 - 2871834 | 23951.5 |
| sugar phosphatase yida | C4M78_14765 | Not Available | Negative | 2871878 - 2872690 | 29722.8 |
| duf937 domain-containing protein | C4M78_14770 | Not Available | Negative | 2872805 - 2873212 | 14114.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C4M78_14775 | Not Available | Negative | 2873347 - 2875761 | 89940.0 |
| dna replication and repair protein recf | C4M78_14780 | Not Available | Negative | 2875790 - 2876863 | 40516.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





