Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii cell invasion protein sipb | C4M78_14525 | Not Available | Positive | 2815169 - 2816950 | 63907.1 |
| hypothetical protein | C4M78_14530 | Not Available | Positive | 2816963 - 2818114 | 43487.1 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | C4M78_14535 | Not Available | Positive | 2818158 - 2819507 | 50035.7 |
| transcriptional regulator hila | C4M78_14540 | Not Available | Positive | 2819710 - 2821407 | 63958.0 |
| hypothetical protein | C4M78_14545 | Not Available | Negative | 2821459 - 2831424 | 346510.0 |
| purine ribonucleoside efflux pump nepi | C4M78_14550 | Not Available | Negative | 2831626 - 2832810 | 41615.2 |
| transcriptional regulator | C4M78_14565 | Not Available | Positive | 2833380 - 2833703 | 11639.2 |
| duf1198 domain-containing protein | C4M78_14570 | Not Available | Negative | 2833819 - 2834271 | 17220.1 |
| ncs2 family permease | C4M78_14575 | Not Available | Negative | 2834324 - 2835658 | 46984.6 |
| adenine deaminase | C4M78_14580 | Not Available | Positive | 2835833 - 2837599 | 63776.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





