Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | C4M78_14475 | Not Available | Negative | 2805831 - 2808149 | 87913.8 |
| sugar transporter | C4M78_14480 | Not Available | Negative | 2808159 - 2809541 | 50965.5 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2809834 - 2809924 | Not Available |
| cytoplasmic protein | C4M78_14490 | Not Available | Positive | 2810034 - 2810183 | 5594.87 |
| sugar efflux transporter setb | C4M78_14495 | Not Available | Positive | 2810567 - 2811751 | 43492.1 |
| eama family transporter | C4M78_14500 | Not Available | Positive | 2811862 - 2812785 | 33106.4 |
| lipoprotein nlpa | C4M78_14505 | Not Available | Negative | 2812789 - 2813607 | 29439.2 |
| hypothetical protein | C4M78_14510 | Not Available | Positive | 2813829 - 2814122 | 11049.3 |
| cesd/sycd/lcrh family type iii secretion system chaperone | C4M78_14515 | Not Available | Positive | 2814424 - 2814921 | 19100.7 |
| hypothetical protein | C4M78_14520 | Not Available | Positive | 2814931 - 2815113 | 6835.91 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





