Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4M78_14370 | Not Available | Positive | 2782414 - 2782710 | 10907.6 |
| dna damage-inducible protein d | C4M78_14380 | Not Available | Positive | 2784277 - 2785101 | 31151.7 |
| trimeric intracellular cation channel family protein | C4M78_14385 | Not Available | Positive | 2785392 - 2786009 | 22049.8 |
| nad-dependent dna ligase ligb | C4M78_14390 | Not Available | Negative | 2786006 - 2787688 | 63158.9 |
| guanylate kinase | C4M78_14395 | Not Available | Positive | 2787946 - 2788569 | 23594.1 |
| dna-directed rna polymerase subunit omega | C4M78_14400 | Not Available | Positive | 2788624 - 2788899 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | C4M78_14405 | Not Available | Positive | 2788918 - 2791026 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C4M78_14410 | Not Available | Positive | 2791033 - 2791722 | 25388.7 |
| atp-dependent dna helicase recg | C4M78_14415 | Not Available | Positive | 2791728 - 2793809 | 76511.2 |
| sodium/glutamate symport carrier protein | C4M78_14420 | Not Available | Negative | 2793843 - 2795048 | 42459.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





