Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | C4M78_13990 | Not Available | Negative | 2708390 - 2709361 | 34972.6 |
| fimbrial chaperone protein | C4M78_13995 | Not Available | Negative | 2709391 - 2710071 | 25429.4 |
| outer membrane usher protein pefc | C4M78_14000 | Not Available | Negative | 2710079 - 2712436 | 87346.7 |
| fimbrial protein | C4M78_14005 | Not Available | Negative | 2712508 - 2713035 | 17697.7 |
| rna polymerase subunit sigma-70 | C4M78_14010 | Not Available | Positive | 2713778 - 2714332 | 21677.8 |
| hypothetical protein | C4M78_14020 | Not Available | Negative | 2715461 - 2716597 | 41990.8 |
| duf3302 domain-containing protein | C4M78_14025 | Not Available | Negative | 2716600 - 2716962 | 13815.8 |
| pts mannitol transporter subunit iicba | C4M78_14030 | Not Available | Positive | 2717499 - 2719412 | 67970.5 |
| mannitol-1-phosphate 5-dehydrogenase | C4M78_14035 | Not Available | Positive | 2719507 - 2720655 | 41140.5 |
| mltr family transcriptional regulator | C4M78_14040 | Not Available | Positive | 2720655 - 2721242 | 21991.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





