Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase iskpn26 | C4M78_13415 | Not Available | Negative | 2591808 - 2592788 | 37802.6 |
| transfer repressor | C4M78_13420 | Not Available | Positive | 2593064 - 2593516 | 16560.2 |
| htdf | C4M78_13425 | Not Available | Positive | 2593506 - 2593931 | 15623.9 |
| plasmid transfer protein | C4M78_13430 | Not Available | Positive | 2593940 - 2594494 | 20492.8 |
| hypothetical protein | C4M78_13435 | Not Available | Positive | 2594614 - 2598918 | 158524.0 |
| signal peptidase i | C4M78_13440 | Not Available | Positive | 2599196 - 2599708 | 19397.9 |
| conjugal transfer protein | C4M78_13445 | Not Available | Positive | 2599695 - 2601206 | 56458.1 |
| plasmid transfer protein | C4M78_13450 | Not Available | Positive | 2601396 - 2602406 | 37019.9 |
| conjugal transfer protein tran | C4M78_13455 | Not Available | Positive | 2602425 - 2605613 | 116884.0 |
| hypothetical protein | C4M78_13460 | Not Available | Negative | 2605642 - 2606514 | 31362.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





