Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isl3 family transposase | C4M78_13200 | Not Available | Negative | 2544752 - 2546029 | 49781.2 |
| permease | C4M78_13205 | Not Available | Negative | 2546042 - 2547076 | 36009.5 |
| arsr family transcriptional regulator | C4M78_13210 | Not Available | Positive | 2547188 - 2547502 | 11315.7 |
| hypothetical protein | C4M78_13220 | Not Available | Negative | 2550191 - 2550928 | 28123.4 |
| repb family plasmid replication initiator protein | C4M78_13225 | Not Available | Negative | 2551325 - 2552380 | 39716.4 |
| duf4165 domain-containing protein | C4M78_13230 | Not Available | Negative | 2553521 - 2555977 | 89985.8 |
| hypothetical protein | C4M78_13235 | Not Available | Positive | 2556350 - 2556976 | 22998.3 |
| is5/is1182 family transposase | C4M78_13245 | Not Available | Positive | 2557147 - 2558070 | 35057.2 |
| is66 family transposase | C4M78_13255 | Not Available | Negative | 2558387 - 2559922 | 57680.9 |
| is66 family insertion sequence hypothetical protein | C4M78_13260 | Not Available | Negative | 2559972 - 2560319 | 12759.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





