Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | C4M78_12850 | Not Available | Negative | 2486391 - 2490344 | 139688.0 |
| conjugal transfer protein | C4M78_12855 | Not Available | Negative | 2490353 - 2491768 | 50430.4 |
| thioredoxin family protein | C4M78_12860 | Not Available | Negative | 2491758 - 2492804 | 39303.0 |
| hypothetical protein | C4M78_12865 | Not Available | Negative | 2493396 - 2493908 | 19166.1 |
| trhr | C4M78_12870 | Not Available | Negative | 2493910 - 2494710 | 30313.3 |
| plasmid transfer protein | C4M78_12875 | Not Available | Positive | 2495469 - 2495954 | 19092.0 |
| hypothetical protein | C4M78_12880 | Not Available | Positive | 2495951 - 2496688 | 28169.7 |
| helicase | C4M78_12885 | Not Available | Positive | 2496698 - 2499844 | 117795.0 |
| hypothetical protein | C4M78_12890 | Not Available | Positive | 2499844 - 2501928 | 78142.3 |
| hypothetical protein | C4M78_12895 | Not Available | Positive | 2501928 - 2503037 | 42600.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





