Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase subunit a | C4M78_12365 | Not Available | Negative | 2403736 - 2406159 | 89982.0 |
| dimethyl sulfoxide reductase subunit a | C4M78_12370 | Not Available | Negative | 2406220 - 2408646 | 89591.7 |
| duf1161 domain-containing protein | C4M78_12375 | Not Available | Negative | 2408845 - 2409150 | 10491.3 |
| ynfc family lipoprotein | C4M78_12380 | Not Available | Positive | 2409258 - 2409968 | 26516.3 |
| spermidine n1-acetyltransferase | C4M78_12385 | Not Available | Negative | 2409971 - 2410531 | 21902.3 |
| hypothetical protein | C4M78_12390 | Not Available | Negative | 2410566 - 2410907 | 12959.4 |
| ynfa family protein | C4M78_12395 | Not Available | Positive | 2411042 - 2411368 | 11902.1 |
| hypothetical protein | C4M78_12400 | Not Available | Positive | 2411405 - 2411593 | 7305.72 |
| starvation-sensing protein rspa | C4M78_12405 | Not Available | Positive | 2411574 - 2412788 | 45971.0 |
| transposase | C4M78_12590 | Not Available | Positive | 2434923 - 2436863 | 74446.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





