Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4M78_12310 | Not Available | Negative | 2394855 - 2394938 | 3206.2 |
| acid shock protein | C4M78_12315 | Not Available | Negative | 2395031 - 2395366 | 11607.1 |
| mfs transporter | C4M78_12325 | Not Available | Negative | 2395763 - 2397016 | 45260.2 |
| lysr family transcriptional regulator | C4M78_12330 | Not Available | Positive | 2397123 - 2398016 | 33270.4 |
| rok family transcriptional regulator | C4M78_12335 | Not Available | Positive | 2398151 - 2399371 | 44276.7 |
| dethiobiotin synthase | C4M78_12340 | Not Available | Positive | 2399496 - 2400191 | 24968.4 |
| voltage-gated clc-type chloride channel clcb | C4M78_12345 | Not Available | Negative | 2400144 - 2401436 | 45707.0 |
| tat proofreading chaperone dmsd | C4M78_12350 | Not Available | Negative | 2401595 - 2402209 | 23375.7 |
| dimethyl sulfoxide reductase anchor subunit | C4M78_12355 | Not Available | Negative | 2402252 - 2403106 | 30521.5 |
| dimethylsulfoxide reductase | C4M78_12360 | Not Available | Negative | 2403108 - 2403725 | 22752.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





