Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine:ornithine antiporter | C4M78_12260 | Not Available | Negative | 2385776 - 2387158 | 49504.5 |
| amino acid abc transporter | C4M78_12265 | Not Available | Negative | 2387137 - 2387271 | 5377.45 |
| duf1471 domain-containing protein | C4M78_12270 | Not Available | Negative | 2387344 - 2388288 | 33874.9 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | C4M78_12275 | Not Available | Positive | 2388812 - 2390344 | 54596.6 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | C4M78_12280 | Not Available | Positive | 2390355 - 2391743 | 48726.0 |
| ai-2e family transporter | C4M78_12285 | Not Available | Negative | 2391768 - 2392802 | 37575.4 |
| hypothetical protein | C4M78_12290 | Not Available | Positive | 2392937 - 2393107 | 6483.71 |
| multidrug transporter subunit mdtj | C4M78_12295 | Not Available | Positive | 2393214 - 2393579 | 13115.7 |
| spermidine export protein mdti | C4M78_12300 | Not Available | Positive | 2393566 - 2393895 | 11720.8 |
| serine protease | C4M78_12305 | Not Available | Negative | 2393934 - 2394755 | 29250.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





