Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slya family transcriptional regulator | C4M78_12060 | Not Available | Positive | 2346070 - 2346504 | 16381.1 |
| outer membrane lipoprotein slyb | C4M78_12065 | Not Available | Negative | 2346551 - 2347018 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | C4M78_12070 | Not Available | Positive | 2347292 - 2348401 | 39542.8 |
| lysozyme inhibitor | C4M78_12075 | Not Available | Positive | 2348499 - 2348828 | 12630.3 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | C4M78_12080 | Not Available | Positive | 2348887 - 2349543 | 25532.6 |
| tyrosine--trna ligase | C4M78_12085 | Not Available | Positive | 2349672 - 2350946 | 47529.6 |
| pyridoxal kinase | C4M78_12090 | Not Available | Positive | 2351005 - 2351868 | 31340.1 |
| glutathione transferase gsta | C4M78_12095 | Not Available | Negative | 2351912 - 2352517 | 22870.6 |
| dipeptide and tripeptide permease a | C4M78_12100 | Not Available | Negative | 2352623 - 2354125 | 54008.4 |
| hypothetical protein | C4M78_12105 | Not Available | Negative | 2354408 - 2354608 | 7910.78 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





