Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | C4M78_11390 | Not Available | Negative | 2217777 - 2219633 | 67204.9 |
| hypothetical protein | C4M78_11395 | Not Available | Negative | 2219576 - 2219740 | 5825.97 |
| nad(p)h nitroreductase | C4M78_11400 | Not Available | Positive | 2219794 - 2220345 | 20073.2 |
| hypothetical protein | C4M78_11405 | Not Available | Positive | 2220371 - 2220520 | 5666.74 |
| selenide, water dikinase seld | C4M78_11410 | Not Available | Positive | 2220462 - 2221505 | 36675.4 |
| dna topoisomerase iii | C4M78_11415 | Not Available | Positive | 2221510 - 2223465 | 73198.0 |
| glutamate dehydrogenase | C4M78_11420 | Not Available | Negative | 2223542 - 2224885 | 48572.2 |
| duf1496 domain-containing protein | C4M78_11425 | Not Available | Positive | 2225121 - 2225393 | 9947.94 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | C4M78_11430 | Not Available | Negative | 2225359 - 2225766 | 15025.9 |
| cdp-alcohol phosphatidyltransferase family protein | C4M78_11435 | Not Available | Positive | 2225853 - 2226473 | 22597.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





