Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C4M78_11135 | Not Available | Negative | 2171301 - 2172038 | 27305.4 |
| atp-dependent rna helicase srmb | C4M78_11140 | Not Available | Positive | 2172170 - 2173504 | 49887.0 |
| lysr family transcriptional regulator | C4M78_11145 | Not Available | Negative | 2173537 - 2174418 | 33226.2 |
| cysteine/o-acetylserine transporter | C4M78_11150 | Not Available | Positive | 2174521 - 2175108 | 21335.7 |
| autonomous glycyl radical cofactor grca | C4M78_11155 | Not Available | Negative | 2175163 - 2175546 | 14269.0 |
| uracil-dna glycosylase | C4M78_11160 | Not Available | Positive | 2175851 - 2176540 | 25682.6 |
| methyltransferase | C4M78_11165 | Not Available | Negative | 2176588 - 2177625 | 37786.5 |
| hypothetical protein | C4M78_11170 | Not Available | Negative | 2177615 - 2177818 | 7710.17 |
| thiol disulfide reductase thioredoxin | C4M78_11175 | Not Available | Positive | 2177832 - 2178251 | 15555.6 |
| dtw domain-containing protein | C4M78_11180 | Not Available | Positive | 2178320 - 2179018 | 25995.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





