Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | C4M78_11085 | Not Available | Negative | 2161754 - 2162659 | 33798.1 |
| ribonuclease 3 | C4M78_11090 | Not Available | Negative | 2162656 - 2163336 | 25551.6 |
| hypothetical protein | C4M78_11095 | Not Available | Positive | 2163280 - 2163558 | 10167.4 |
| s26 family signal peptidase | C4M78_11100 | Not Available | Negative | 2163609 - 2164583 | 35962.3 |
| elongation factor 4 | C4M78_11105 | Not Available | Negative | 2164599 - 2166398 | 66574.1 |
| soxr reducing system protein rsec | C4M78_11110 | Not Available | Negative | 2166596 - 2167075 | 16611.3 |
| sigma-e factor regulatory protein rseb | C4M78_11115 | Not Available | Negative | 2167072 - 2168028 | 35751.8 |
| anti-sigma-e factor rsea | C4M78_11120 | Not Available | Negative | 2168028 - 2168678 | 24322.8 |
| ecf rna polymerase sigma-e factor | C4M78_11125 | Not Available | Negative | 2168711 - 2169286 | 21697.0 |
| l-aspartate oxidase | C4M78_11130 | Not Available | Positive | 2169694 - 2171316 | 60225.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





