Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | C4M78_10935 | Not Available | Positive | 2129797 - 2130315 | 20536.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | C4M78_10940 | Not Available | Positive | 2130315 - 2130635 | 11329.3 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | C4M78_10945 | Not Available | Positive | 2130632 - 2131444 | 28471.3 |
| phenoxybenzoate dioxygenase | C4M78_10950 | Not Available | Positive | 2131454 - 2132656 | 43831.3 |
| doxx family protein | C4M78_10955 | Not Available | Positive | 2132753 - 2133175 | 15198.3 |
| aldose 1-epimerase | C4M78_10960 | Not Available | Negative | 2133223 - 2134095 | 32646.2 |
| alcohol dehydrogenase | C4M78_10965 | Not Available | Negative | 2134107 - 2135168 | 38043.0 |
| abc transporter permease | C4M78_10970 | Not Available | Negative | 2135234 - 2136232 | 34502.7 |
| sugar abc transporter atp-binding protein | C4M78_10975 | Not Available | Negative | 2136257 - 2137768 | 54933.7 |
| sugar abc transporter substrate-binding protein | C4M78_10980 | Not Available | Negative | 2137791 - 2138774 | 35111.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





