Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | C4M78_10420 | Not Available | Negative | 2027234 - 2027860 | 22534.6 |
| hypothetical protein | C4M78_10425 | Not Available | Positive | 2027984 - 2028166 | 7110.99 |
| phosphoribosylformylglycinamidine cyclo-ligase | C4M78_10430 | Not Available | Positive | 2028185 - 2029222 | 36875.2 |
| phosphoribosylglycinamide formyltransferase | C4M78_10435 | Not Available | Positive | 2029222 - 2029860 | 23253.6 |
| polyphosphate kinase | C4M78_10440 | Not Available | Positive | 2030032 - 2032098 | 80436.1 |
| exopolyphosphatase | C4M78_10445 | Not Available | Positive | 2032103 - 2033644 | 58139.5 |
| sensor domain-containing phosphodiesterase | C4M78_10450 | Not Available | Negative | 2033683 - 2035926 | 85761.9 |
| exodeoxyribonuclease vii large subunit | C4M78_10765 | Not Available | Positive | 2081940 - 2083307 | 51213.6 |
| rata-like protein | C4M78_10770 | Not Available | Negative | 2083361 - 2091436 | 284017.0 |
| hypothetical protein | C4M78_10775 | Not Available | Negative | 2091546 - 2092538 | 34710.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





