Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | C4M78_10320 | Not Available | Negative | 2005855 - 2006733 | 31285.9 |
| glycine cleavage system transcriptional repressor | C4M78_10325 | Not Available | Positive | 2006879 - 2007451 | 20769.8 |
| peroxiredoxin | C4M78_10330 | Not Available | Positive | 2007451 - 2007921 | 17634.9 |
| 4fe-4s dicluster domain-containing protein | C4M78_10335 | Not Available | Positive | 2008174 - 2008791 | 22191.5 |
| hydrogenase 4 subunit b | C4M78_10340 | Not Available | Positive | 2008791 - 2010809 | 72685.5 |
| hydrogenase 3 membrane subunit | C4M78_10345 | Not Available | Positive | 2010820 - 2011767 | 34328.3 |
| hydrogenase-4 component d | C4M78_10350 | Not Available | Positive | 2011784 - 2013223 | 51771.7 |
| hydrogenase 4 membrane subunit | C4M78_10355 | Not Available | Positive | 2013235 - 2013885 | 23403.1 |
| hydrogenase 4 subunit f | C4M78_10360 | Not Available | Positive | 2013890 - 2015470 | 56514.3 |
| hydrogenase-4 component g | C4M78_10365 | Not Available | Positive | 2015460 - 2017175 | 65025.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





