Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1934832 - 1934907 | Not Available |
| lysr family transcriptional regulator | C4M78_09970 | Not Available | Negative | 1935016 - 1935900 | 33630.4 |
| xapx domain-containing protein | C4M78_09975 | Not Available | Negative | 1935941 - 1936099 | 5691.39 |
| nucleoside permease | C4M78_09980 | Not Available | Negative | 1936152 - 1937408 | 46140.4 |
| xanthosine phosphorylase | C4M78_09985 | Not Available | Negative | 1937468 - 1938301 | 29882.4 |
| hypothetical protein | C4M78_09990 | Not Available | Positive | 1938550 - 1939314 | 29237.6 |
| lysr family transcriptional regulator | C4M78_09995 | Not Available | Negative | 1939352 - 1940278 | 33891.1 |
| bile acid:sodium symporter | C4M78_10000 | Not Available | Positive | 1940368 - 1941366 | 36331.7 |
| hypothetical protein | C4M78_10005 | Not Available | Negative | 1941363 - 1941581 | 8419.56 |
| nad-dependent dna ligase liga | C4M78_10010 | Not Available | Negative | 1941583 - 1943598 | 73640.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





