Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FEX725 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1355591 bp
Thymine Count
1355096 bp
Guanine Count
1350474 bp
Cytosine Count
1376764 bp
Genome Length
5437925 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
314 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 2 large subunit | C4M78_08065 | Not Available | Negative | 1559486 - 1561279 | 66306.1 |
| [ni/fe] hydrogenase small subunit | C4M78_08070 | Not Available | Negative | 1561276 - 1562394 | 40667.6 |
| Trna-ser | Not Available | Not Available | Positive | 1562821 - 1562908 | Not Available |
| bax inhibitor protein | C4M78_08080 | Not Available | Positive | 1563115 - 1563774 | 23364.3 |
| sulfurtransferase tuse | C4M78_08085 | Not Available | Positive | 1563866 - 1564195 | 12395.0 |
| acylphosphatase | C4M78_08090 | Not Available | Negative | 1564192 - 1564470 | 10272.3 |
| ribosomal rna large subunit methyltransferase i | C4M78_08095 | Not Available | Positive | 1564565 - 1565755 | 44356.5 |
| heat-shock protein hspq | C4M78_08100 | Not Available | Positive | 1565813 - 1566130 | 11779.9 |
| coa-binding protein | C4M78_08105 | Not Available | Negative | 1566175 - 1566588 | 14702.0 |
| duf2057 domain-containing protein | C4M78_08110 | Not Available | Positive | 1566761 - 1567423 | 24595.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





