Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | C4K41_03365 | Not Available | Positive | 625048 - 625530 | 17218.6 |
| glutathione s-transferase family protein | C4K41_03370 | Not Available | Positive | 625600 - 626586 | 37391.1 |
| duf805 domain-containing protein | C4K41_03375 | Not Available | Positive | 626869 - 627237 | 14441.9 |
| lysr family transcriptional regulator | C4K41_03380 | Not Available | Negative | 627271 - 628167 | 33231.3 |
| pirin family protein | C4K41_03385 | Not Available | Positive | 628272 - 628973 | 25930.9 |
| hypothetical protein | C4K41_03390 | Not Available | Positive | 628996 - 629160 | 5935.07 |
| serine dehydratase subunit alpha family protein | C4K41_03395 | Not Available | Negative | 629292 - 630602 | 45336.8 |
| transporter | C4K41_03400 | Not Available | Negative | 630630 - 631961 | 48299.6 |
| l-serine ammonia-lyase | C4K41_03410 | Not Available | Negative | 632236 - 633600 | 48534.6 |
| reactive intermediate/imine deaminase | C4K41_03415 | Not Available | Negative | 633672 - 634061 | 14008.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





