Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage minor tail protein l | C4K41_27730 | Not Available | Positive | 5214985 - 5215143 | 6166.06 |
| Trna-gly | Not Available | Not Available | Positive | 5215146 - 5215220 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5215227 - 5215302 | Not Available |
| elongation factor tu | C4K41_27745 | Not Available | Positive | 5215417 - 5215628 | 7595.95 |
| hypothetical protein | C4K41_27750 | Not Available | Negative | 5215629 - 5216064 | 16319.5 |
| hypothetical protein | C4K41_27755 | Not Available | Positive | 5216098 - 5216302 | 7618.24 |
| hypothetical protein | C4K41_27760 | Not Available | Positive | 5216278 - 5216539 | 9422.19 |
| Trna-glu | Not Available | Not Available | Positive | 5216682 - 5216757 | Not Available |
| phage tail tape measure protein | C4K41_27775 | Not Available | Positive | 5216968 - 5217330 | 12738.1 |
| s49 family peptidase | C4K41_27780 | Not Available | Negative | 5217384 - 5217790 | 14313.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





