Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sopa | C4K41_27060 | Not Available | Positive | 5141267 - 5142433 | 43690.6 |
| plasmid-partitioning protein | C4K41_27065 | Not Available | Positive | 5142433 - 5143404 | 35388.3 |
| replication protein a | C4K41_27075 | Not Available | Positive | 5143816 - 5144180 | 13024.7 |
| duf4238 domain-containing protein | C4K41_27080 | Not Available | Positive | 5144284 - 5145213 | 34860.6 |
| phage portal protein | C4K41_27085 | Not Available | Negative | 5145617 - 5146564 | 36034.9 |
| phage tail protein | C4K41_27090 | Not Available | Negative | 5146565 - 5147145 | 20615.7 |
| hypothetical protein | C4K41_27095 | Not Available | Positive | 5147476 - 5147853 | 13568.3 |
| integrase | C4K41_27100 | Not Available | Negative | 5147876 - 5148529 | 24905.4 |
| hypothetical protein | C4K41_27105 | Not Available | Negative | 5148567 - 5149265 | 26179.2 |
| exonuclease | C4K41_27110 | Not Available | Negative | 5149310 - 5151279 | 73670.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





