Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor feci | C4K41_25545 | Not Available | Positive | 4935987 - 4936508 | 19481.5 |
| protein fecr | C4K41_25550 | Not Available | Positive | 4936505 - 4937458 | 35534.1 |
| fe(3+) dicitrate transporter feca | C4K41_25555 | Not Available | Positive | 4937545 - 4939869 | 85312.3 |
| fe(3+)-dicitrate abc transporter substrate-binding protein fecb | C4K41_25560 | Not Available | Positive | 4939914 - 4940816 | 33108.1 |
| fe3+ dicitrate abc transporter permease | C4K41_25565 | Not Available | Positive | 4940813 - 4941811 | 34894.9 |
| iron-dicitrate transporter subunit fecd | C4K41_25570 | Not Available | Positive | 4941808 - 4942764 | 34152.7 |
| fe(3+) dicitrate transport atp-binding protein fece | C4K41_25575 | Not Available | Positive | 4942765 - 4943532 | 28192.5 |
| hypothetical protein | C4K41_25580 | Not Available | Negative | 4944089 - 4944346 | 9465.12 |
| is3 family transposase | C4K41_25585 | Not Available | Negative | 4944429 - 4944554 | 4711.26 |
| phage replisome organizer | C4K41_25715 | Not Available | Negative | 4957830 - 4958254 | 15761.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





