Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | C4K41_24635 | Not Available | Negative | 4785444 - 4788017 | 95618.9 |
| peptidoglycan editing factor pgef | C4K41_24640 | Not Available | Negative | 4788147 - 4788878 | 26355.4 |
| ribosomal large subunit pseudouridine synthase d | C4K41_24645 | Not Available | Negative | 4788875 - 4789855 | 37157.9 |
| outer membrane protein assembly factor bamd | C4K41_24650 | Not Available | Positive | 4789990 - 4790727 | 27830.9 |
| hypothetical protein | C4K41_24655 | Not Available | Positive | 4790756 - 4790962 | 7936.92 |
| ribosome-associated inhibitor a | C4K41_24660 | Not Available | Positive | 4790997 - 4791338 | 12785.3 |
| hypothetical protein | C4K41_24665 | Not Available | Positive | 4791442 - 4791489 | 1912.35 |
| prephenate dehydratase | C4K41_24670 | Not Available | Positive | 4791588 - 4792748 | 43056.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | C4K41_24675 | Not Available | Negative | 4792791 - 4793912 | 42032.9 |
| 3-deoxy-7-phosphoheptulonate synthase | C4K41_24680 | Not Available | Negative | 4793923 - 4794993 | 38776.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





