Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | C4K41_24580 | Not Available | Positive | 4775992 - 4776663 | 24673.9 |
| duf416 domain-containing protein | C4K41_24585 | Not Available | Positive | 4776706 - 4777296 | 22581.8 |
| dna-binding protein hu-alpha | C4K41_24590 | Not Available | Positive | 4777483 - 4777755 | 9535.51 |
| duf1481 domain-containing protein | C4K41_24595 | Not Available | Positive | 4777768 - 4778463 | 26338.8 |
| zinc resistance-associated protein | C4K41_24600 | Not Available | Negative | 4778465 - 4778884 | 15056.1 |
| zinc resistance-associated protein | C4K41_24605 | Not Available | Negative | 4778887 - 4779015 | 4982.78 |
| two-component system sensor histidine kinase zras | C4K41_24610 | Not Available | Positive | 4779122 - 4780498 | 50519.1 |
| two-component system response regulator zrar | C4K41_24615 | Not Available | Positive | 4780495 - 4781820 | 48485.5 |
| phosphoribosylamine--glycine ligase | C4K41_24620 | Not Available | Negative | 4781817 - 4783106 | 45948.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C4K41_24625 | Not Available | Negative | 4783118 - 4784707 | 57387.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





