Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tago | C4K41_24425 | Not Available | Negative | 4740813 - 4741556 | 26450.7 |
| type vi secretion system atpase tssh | C4K41_24430 | Not Available | Negative | 4741553 - 4744312 | 100201.0 |
| hypothetical protein | C4K41_24435 | Not Available | Negative | 4744322 - 4745086 | 29417.9 |
| type vi secretion system baseplate subunit tssk | C4K41_24440 | Not Available | Negative | 4745091 - 4746437 | 49894.3 |
| type vi secretion system lipoprotein tssj | C4K41_24445 | Not Available | Negative | 4746440 - 4746964 | 19252.9 |
| type vi secretion system-associated fha domain protein tagh | C4K41_24450 | Not Available | Negative | 4746961 - 4748241 | 47192.9 |
| type vi secretion system baseplate subunit tssg | C4K41_24455 | Not Available | Negative | 4748258 - 4749307 | 39103.0 |
| type vi secretion system baseplate subunit tssf | C4K41_24460 | Not Available | Negative | 4749271 - 4751130 | 71364.6 |
| type vi secretion system baseplate subunit tsse | C4K41_24465 | Not Available | Negative | 4751118 - 4751543 | 15986.8 |
| type vi secretion system contractile sheath large subunit | C4K41_24470 | Not Available | Negative | 4751548 - 4753032 | 55658.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





