Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | C4K41_24375 | Not Available | Positive | 4730308 - 4731030 | 27212.7 |
| ribonuclease hi | C4K41_24380 | Not Available | Negative | 4731027 - 4731494 | 17597.9 |
| dna polymerase iii subunit epsilon | C4K41_24385 | Not Available | Positive | 4731559 - 4732290 | 27130.5 |
| hypothetical protein | C4K41_24390 | Not Available | Negative | 4732179 - 4732409 | 8483.46 |
| Trna-asp | Not Available | Not Available | Positive | 4732423 - 4732499 | Not Available |
| hypothetical protein | C4K41_24400 | Not Available | Positive | 4732828 - 4733613 | 29469.2 |
| type vi secretion system tube protein hcp | C4K41_24405 | Not Available | Negative | 4733953 - 4734432 | 17511.6 |
| hypothetical protein | C4K41_24410 | Not Available | Negative | 4734450 - 4735808 | 51682.5 |
| type vi secretion system membrane subunit tssm | C4K41_24415 | Not Available | Negative | 4735819 - 4739346 | 134548.0 |
| type vi secretion system protein tssa | C4K41_24420 | Not Available | Negative | 4739366 - 4740874 | 56392.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





