Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit beta | C4K41_24105 | Not Available | Positive | 4683396 - 4684940 | 58534.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | C4K41_24110 | Not Available | Positive | 4684940 - 4685635 | 26153.1 |
| respiratory nitrate reductase subunit gamma | C4K41_24115 | Not Available | Positive | 4685632 - 4686312 | 25687.1 |
| phzf family protein | C4K41_24120 | Not Available | Positive | 4686392 - 4687285 | 32144.4 |
| n-hydroxyarylamine o-acetyltransferase | C4K41_24125 | Not Available | Negative | 4687381 - 4688226 | 32279.6 |
| flavin reductase family protein | C4K41_24130 | Not Available | Positive | 4688401 - 4688970 | 20942.1 |
| hypothetical protein | C4K41_24135 | Not Available | Negative | 4689036 - 4689200 | 6258.52 |
| acetyltransferase | C4K41_24140 | Not Available | Negative | 4689287 - 4689502 | 8072.59 |
| peptidase m35 | C4K41_24155 | Not Available | Negative | 4690674 - 4691471 | 31017.0 |
| type vi secretion system tip protein vgrg | C4K41_24160 | Not Available | Negative | 4691425 - 4692719 | 47139.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





