Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface exclusion protein | C4K41_23845 | Not Available | Negative | 4636319 - 4636822 | 19372.4 |
| conjugal transfer protein trag | C4K41_23850 | Not Available | Negative | 4636837 - 4637070 | 8953.27 |
| conjugal transfer protein trag | C4K41_23855 | Not Available | Negative | 4637088 - 4639664 | 93107.3 |
| conjugal transfer protein trah | C4K41_23860 | Not Available | Negative | 4639661 - 4641037 | 50395.4 |
| conjugal transfer protein trbj | C4K41_23865 | Not Available | Negative | 4641034 - 4641396 | 13344.6 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | C4K41_23870 | Not Available | Negative | 4641326 - 4641871 | 19786.0 |
| type-f conjugative transfer system pilin chaperone traq | C4K41_23875 | Not Available | Negative | 4641858 - 4642142 | 10965.5 |
| conjugal transfer protein trba | C4K41_23880 | Not Available | Negative | 4642261 - 4642608 | 12962.6 |
| type-f conjugative transfer system pilin assembly protein traf | C4K41_23885 | Not Available | Negative | 4642624 - 4643397 | 29234.4 |
| conjugal transfer protein trbe | C4K41_23890 | Not Available | Negative | 4643360 - 4643620 | 9941.15 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





