Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome alternative rescue factor arfa | C4K41_23540 | Not Available | Positive | 4574770 - 4574988 | 8229.89 |
| large conductance mechanosensitive channel protein mscl | C4K41_23545 | Not Available | Negative | 4574985 - 4575398 | 15072.8 |
| trk system potassium uptake protein trka | C4K41_23550 | Not Available | Negative | 4575528 - 4576904 | 50370.8 |
| 16s rrna m5c967 methyltransferase | C4K41_23555 | Not Available | Negative | 4576926 - 4578215 | 48330.2 |
| methionyl-trna formyltransferase | C4K41_23560 | Not Available | Negative | 4578267 - 4579214 | 34218.6 |
| peptide deformylase | C4K41_23565 | Not Available | Negative | 4579229 - 4579738 | 19329.6 |
| dna-protecting protein dpra | C4K41_23570 | Not Available | Positive | 4579868 - 4580992 | 40895.2 |
| duf494 domain-containing protein | C4K41_23575 | Not Available | Positive | 4580964 - 4581437 | 18484.2 |
| hypothetical protein | C4K41_23580 | Not Available | Positive | 4581466 - 4582008 | 19859.9 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C4K41_23585 | Not Available | Positive | 4582013 - 4582585 | 20641.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





