Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein j | C4K41_23340 | Not Available | Negative | 4550470 - 4551057 | 22246.6 |
| type ii secretion system protein gspi | C4K41_23345 | Not Available | Negative | 4551050 - 4551445 | 14583.0 |
| type ii secretion system protein gsph | C4K41_23350 | Not Available | Negative | 4551442 - 4551951 | 18484.0 |
| type ii secretion system protein gspg | C4K41_23355 | Not Available | Negative | 4551959 - 4552396 | 15925.1 |
| type ii secretion system protein gspf | C4K41_23360 | Not Available | Negative | 4552406 - 4553602 | 44383.9 |
| type ii secretion system protein gspe | C4K41_23365 | Not Available | Negative | 4553599 - 4555080 | 54670.0 |
| type ii secretion system protein gspd | C4K41_23370 | Not Available | Negative | 4555090 - 4557042 | 70747.3 |
| type ii secretion system protein gspc | C4K41_23375 | Not Available | Negative | 4557026 - 4557841 | 30053.8 |
| general secretion pathway protein gspa | C4K41_23380 | Not Available | Positive | 4558021 - 4559490 | 55412.3 |
| general secretion pathway protein gspb | C4K41_23385 | Not Available | Positive | 4559492 - 4559911 | 15834.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





