Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | C4K41_23120 | Not Available | Positive | 4508058 - 4508672 | 22691.5 |
| two-component system sensor histidine kinase evgs | C4K41_23125 | Not Available | Positive | 4508677 - 4512270 | 134911.0 |
| coa:oxalate coa-transferase | C4K41_23130 | Not Available | Negative | 4512326 - 4513471 | 41719.2 |
| transporter yfdv | C4K41_23135 | Not Available | Negative | 4513545 - 4514489 | 33617.9 |
| oxalyl-coa decarboxylase | C4K41_23140 | Not Available | Negative | 4514559 - 4516253 | 60614.9 |
| formyl-coa--oxalate coa-transferase | C4K41_23145 | Not Available | Negative | 4516307 - 4517557 | 45830.7 |
| hypothetical protein | C4K41_23150 | Not Available | Negative | 4518069 - 4518704 | 22964.4 |
| hypothetical protein | C4K41_23155 | Not Available | Positive | 4519000 - 4519275 | 10043.3 |
| duf2545 domain-containing protein | C4K41_23160 | Not Available | Negative | 4519352 - 4519594 | 8969.6 |
| lipid a biosynthesis palmitoleoyl acyltransferase | C4K41_23170 | Not Available | Positive | 4519947 - 4520867 | 35570.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





