Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family transcriptional regulator | C4K41_22210 | Not Available | Negative | 4358775 - 4358945 | 6341.6 |
| peptidyl-arginine deiminase | C4K41_22215 | Not Available | Negative | 4359133 - 4359798 | 24592.6 |
| transcriptional regulator | C4K41_22220 | Not Available | Negative | 4360045 - 4360214 | 6522.83 |
| gtpase | C4K41_22225 | Not Available | Negative | 4360417 - 4361301 | 33278.1 |
| hypothetical protein | C4K41_22230 | Not Available | Positive | 4361295 - 4361480 | 7064.75 |
| hypothetical protein | C4K41_22235 | Not Available | Positive | 4361402 - 4362625 | 48649.2 |
| inovirus gp2 family protein | C4K41_22240 | Not Available | Positive | 4364078 - 4364809 | 27648.0 |
| hypothetical protein | C4K41_22245 | Not Available | Positive | 4365156 - 4365731 | 21904.0 |
| alpa family transcriptional regulator | C4K41_22250 | Not Available | Positive | 4365800 - 4366033 | 8998.71 |
| hypothetical protein | C4K41_22255 | Not Available | Positive | 4366005 - 4366250 | 8730.18 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





