Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C4K41_22160 | Not Available | Negative | 4351295 - 4351951 | 23648.6 |
| nfed family protein | C4K41_22165 | Not Available | Negative | 4352136 - 4352579 | 16406.1 |
| spfh/band 7/phb domain protein | C4K41_22170 | Not Available | Negative | 4352642 - 4353595 | 34943.4 |
| duf1187 domain-containing protein | C4K41_22175 | Not Available | Negative | 4353641 - 4353835 | 7329.78 |
| caif/grla family transcriptional regulator | C4K41_22180 | Not Available | Negative | 4353828 - 4354334 | 19517.6 |
| replication initiation protein | C4K41_22185 | Not Available | Positive | 4355418 - 4356446 | 39980.4 |
| hypothetical protein | C4K41_22190 | Not Available | Negative | 4356544 - 4356762 | 8442.34 |
| replication protein repa4 | C4K41_22195 | Not Available | Negative | 4357013 - 4357132 | 4353.31 |
| hok/gef family protein | C4K41_22200 | Not Available | Positive | 4357850 - 4358011 | 6092.56 |
| hypothetical protein | C4K41_22205 | Not Available | Positive | 4358185 - 4358757 | 22114.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





