Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | C4K41_22110 | Not Available | Negative | 4345275 - 4346510 | 45573.9 |
| conjugal transfer protein | C4K41_22115 | Not Available | Negative | 4346513 - 4346812 | 10487.8 |
| hypothetical protein | C4K41_22120 | Not Available | Negative | 4346879 - 4347514 | 23054.4 |
| dna primase | C4K41_22125 | Not Available | Positive | 4347658 - 4348371 | 28484.7 |
| hypothetical protein | C4K41_22130 | Not Available | Negative | 4348594 - 4348818 | 8376.01 |
| conjugal transfer protein trbj | C4K41_22135 | Not Available | Negative | 4348827 - 4349471 | 24283.7 |
| conjugal transfer protein traa | C4K41_22140 | Not Available | Negative | 4349477 - 4350472 | 35415.3 |
| hypothetical protein | C4K41_22145 | Not Available | Negative | 4350476 - 4350733 | 9620.51 |
| hypothetical protein | C4K41_22150 | Not Available | Negative | 4350730 - 4351032 | 11338.2 |
| hypothetical protein | C4K41_22155 | Not Available | Negative | 4351013 - 4351270 | 9785.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





