Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | C4K41_22010 | Not Available | Negative | 4327001 - 4327483 | 18159.2 |
| hypothetical protein | C4K41_22015 | Not Available | Negative | 4327550 - 4328107 | 19811.6 |
| type ii secretion protein f | C4K41_22020 | Not Available | Negative | 4328152 - 4329261 | 41831.3 |
| type ii secretion protein e | C4K41_22025 | Not Available | Negative | 4329252 - 4330790 | 57347.3 |
| type iv pilus biogenesis protein pilp | C4K41_22030 | Not Available | Negative | 4330815 - 4331309 | 17606.1 |
| pilin accessory family protein | C4K41_22035 | Not Available | Negative | 4331293 - 4332615 | 49822.3 |
| piln family type ivb pilus formation outer membrane protein | C4K41_22040 | Not Available | Negative | 4332654 - 4334297 | 58009.9 |
| hypothetical protein | C4K41_22045 | Not Available | Negative | 4334290 - 4334775 | 18214.3 |
| type iv secretory system conjugative dna transfer family protein | C4K41_22050 | Not Available | Negative | 4334822 - 4336780 | 73352.0 |
| p-type dna transfer atpase virb11 | C4K41_22055 | Not Available | Negative | 4336796 - 4337851 | 39831.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





