Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone fimc | C4K41_21855 | Not Available | Negative | 4302985 - 4303710 | 26660.5 |
| fimbrin-like protein fimi | C4K41_21860 | Not Available | Negative | 4303747 - 4304286 | 19374.4 |
| type-1 fimbrial protein subunit a | C4K41_21865 | Not Available | Negative | 4304351 - 4304899 | 18171.3 |
| hypothetical protein | C4K41_21870 | Not Available | Positive | 4305112 - 4305465 | 13859.0 |
| type 1 fimbriae regulatory protein fime | C4K41_21875 | Not Available | Negative | 4305378 - 4305974 | 23117.6 |
| tyrosine recombinase | C4K41_21880 | Not Available | Negative | 4306452 - 4306859 | 15639.8 |
| cobalamin biosynthesis protein cbix | C4K41_21890 | Not Available | Positive | 4307205 - 4307483 | 10664.7 |
| hypothetical protein | C4K41_21895 | Not Available | Negative | 4307870 - 4308052 | 7063.45 |
| type ii toxin-antitoxin system hica family toxin | C4K41_21900 | Not Available | Positive | 4308610 - 4308792 | 6648.32 |
| copg family transcriptional regulator | C4K41_21905 | Not Available | Positive | 4308817 - 4309254 | 16115.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





