Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 4200658 - 4200733 | Not Available |
| fmn/fad transporter | C4K41_21325 | Not Available | Negative | 4200834 - 4202321 | 54177.7 |
| Trna-asn | Not Available | Not Available | Positive | 4202482 - 4202557 | Not Available |
| duf4102 domain-containing protein | C4K41_21335 | Not Available | Positive | 4202738 - 4204009 | 49115.5 |
| site-specific dna-methyltransferase | C4K41_21340 | Not Available | Positive | 4204189 - 4206165 | 75413.3 |
| restriction endonuclease subunit r | C4K41_21345 | Not Available | Positive | 4206175 - 4209135 | 111392.0 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C4K41_21350 | Not Available | Negative | 4209602 - 4210486 | 30177.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | C4K41_21355 | Not Available | Negative | 4211150 - 4211713 | 18950.8 |
| conjugal transfer protein trad | C4K41_21360 | Not Available | Negative | 4212289 - 4212612 | 12355.2 |
| hypothetical protein | C4K41_21365 | Not Available | Negative | 4212712 - 4213308 | 23678.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





