Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | C4K41_21110 | Not Available | Negative | 4143132 - 4144361 | 46323.0 |
| pts sugar transporter subunit iia | C4K41_21115 | Not Available | Negative | 4144425 - 4144865 | 16493.9 |
| inner membrane transport permease yadh | C4K41_21120 | Not Available | Negative | 4144970 - 4145740 | 28517.9 |
| abc transporter atp-binding protein | C4K41_21125 | Not Available | Negative | 4145737 - 4146663 | 34679.2 |
| carbonate dehydratase | C4K41_21130 | Not Available | Positive | 4146772 - 4147434 | 25140.3 |
| hypoxanthine phosphoribosyltransferase | C4K41_21135 | Not Available | Negative | 4147475 - 4148011 | 20116.4 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | C4K41_21140 | Not Available | Positive | 4148217 - 4150607 | 86799.2 |
| multicopper oxidase cueo | C4K41_21145 | Not Available | Negative | 4150654 - 4152204 | 56646.7 |
| hypothetical protein | C4K41_21150 | Not Available | Positive | 4152370 - 4152717 | 12854.4 |
| polyamine aminopropyltransferase | C4K41_21155 | Not Available | Positive | 4152823 - 4153689 | 32336.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





