Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C4K41_20960 | Not Available | Positive | 4110499 - 4111197 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | C4K41_20965 | Not Available | Positive | 4111190 - 4111990 | 29296.3 |
| hypothetical protein | C4K41_20970 | Not Available | Positive | 4112028 - 4112651 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | C4K41_20975 | Not Available | Negative | 4112698 - 4113042 | 12101.2 |
| clc family h(+)/cl(-) exchange transporter | C4K41_20980 | Not Available | Negative | 4113124 - 4114545 | 50407.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | C4K41_20985 | Not Available | Positive | 4114770 - 4116050 | 45415.7 |
| fe(3+)-hydroxamate abc transporter permease fhub | C4K41_20990 | Not Available | Negative | 4116085 - 4118067 | 70398.5 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | C4K41_20995 | Not Available | Negative | 4118064 - 4118954 | 33051.3 |
| iron(3+)-hydroxamate import atp-binding protein fhuc | C4K41_21000 | Not Available | Negative | 4118954 - 4119751 | 28872.2 |
| ferrichrome porin fhua | C4K41_21005 | Not Available | Negative | 4119802 - 4122045 | 82156.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





