Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | C4K41_20540 | Not Available | Positive | 4032246 - 4033331 | 40499.4 |
| dtdp-4-dehydrorhamnose reductase | C4K41_20545 | Not Available | Positive | 4033331 - 4034230 | 32664.8 |
| glucose-1-phosphate thymidylyltransferase rfba | C4K41_20550 | Not Available | Positive | 4034288 - 4035166 | 32482.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | C4K41_20555 | Not Available | Positive | 4035171 - 4035719 | 20833.7 |
| flippase | C4K41_20560 | Not Available | Positive | 4035751 - 4036989 | 45927.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C4K41_20565 | Not Available | Positive | 4036999 - 4038126 | 42138.4 |
| glycosyl transferase family 2 | C4K41_20570 | Not Available | Positive | 4038141 - 4039205 | 40880.1 |
| epsg family protein | C4K41_20575 | Not Available | Positive | 4039257 - 4040261 | 39320.5 |
| glycosyltransferase family 2 protein | C4K41_20580 | Not Available | Positive | 4040263 - 4041222 | 36716.4 |
| glycosyltransferase family 1 protein | C4K41_20585 | Not Available | Positive | 4041232 - 4042296 | 41033.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





