Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | C4K41_20170 | Not Available | Positive | 3959026 - 3959277 | 9909.82 |
| transposase | C4K41_20175 | Not Available | Negative | 3959540 - 3960481 | 35873.3 |
| hypothetical protein | C4K41_20180 | Not Available | Negative | 3960546 - 3960812 | 10514.9 |
| post-segregation killing protein pndc | C4K41_20185 | Not Available | Negative | 3960904 - 3961338 | 16536.6 |
| hypothetical protein | C4K41_20190 | Not Available | Negative | 3961361 - 3961606 | 8456.72 |
| hypothetical protein | C4K41_20195 | Not Available | Positive | 3961628 - 3961927 | 10406.3 |
| antirestriction protein arda | C4K41_20200 | Not Available | Negative | 3962067 - 3962567 | 19140.7 |
| hypothetical protein | C4K41_20210 | Not Available | Negative | 3963030 - 3963626 | 22249.9 |
| plasmid sos inhibition protein a | C4K41_20215 | Not Available | Negative | 3963623 - 3964342 | 27650.9 |
| conjugation system sos inhibitor psib | C4K41_20220 | Not Available | Negative | 3964339 - 3964773 | 15864.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





