Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | C4K41_19920 | Not Available | Positive | 3910603 - 3912156 | 58286.3 |
| pilus assembly protein pilr | C4K41_19925 | Not Available | Positive | 3912169 - 3913266 | 41419.4 |
| pilus assembly protein pilx | C4K41_19930 | Not Available | Positive | 3913284 - 3913898 | 21240.2 |
| lytic transglycosylase | C4K41_19935 | Not Available | Positive | 3913908 - 3914468 | 20760.4 |
| prepilin peptidase | C4K41_19940 | Not Available | Positive | 3914453 - 3915109 | 24602.8 |
| shufflon protein a | C4K41_19945 | Not Available | Positive | 3915109 - 3916533 | 49532.7 |
| prepilin | C4K41_19950 | Not Available | Negative | 3916530 - 3916766 | 8440.06 |
| hypothetical protein | C4K41_19955 | Not Available | Positive | 3916795 - 3917001 | 7763.58 |
| cupin fold metalloprotein, wbuc family | C4K41_19960 | Not Available | Positive | 3917247 - 3917579 | 12070.3 |
| class a extended-spectrum beta-lactamase ctx-m-1 | C4K41_19965 | Not Available | Negative | 3917626 - 3918501 | 31247.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





