Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | C4K41_19750 | Not Available | Positive | 3888305 - 3888481 | 6565.82 |
| is6 family transposase is15div | C4K41_19760 | Not Available | Negative | 3889308 - 3890012 | 27896.9 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada5 | C4K41_19765 | Not Available | Negative | 3890214 - 3891002 | 29043.8 |
| trimethoprim-resistant dihydrofolate reductase dfra17 | C4K41_19770 | Not Available | Negative | 3891133 - 3891606 | 17560.2 |
| integron integrase | C4K41_19775 | Not Available | Positive | 3891764 - 3892777 | 38383.4 |
| duf3330 domain-containing protein | C4K41_19780 | Not Available | Positive | 3892716 - 3893330 | 21700.8 |
| transposase | C4K41_19785 | Not Available | Positive | 3893506 - 3894066 | 21288.5 |
| invasion protein | C4K41_19795 | Not Available | Negative | 3896445 - 3896567 | 4500.33 |
| hypothetical protein | C4K41_19800 | Not Available | Positive | 3896561 - 3896833 | 10816.7 |
| is91 family transposase | C4K41_19805 | Not Available | Positive | 3896814 - 3898022 | 45893.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





