Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain DP254 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1296665 bp
Thymine Count
1296901 bp
Guanine Count
1331328 bp
Cytosine Count
1307948 bp
Genome Length
5232842 bp
Protein-coding Genes
5112 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | C4K41_19385 | Not Available | Negative | 3823936 - 3824652 | 27145.4 |
| tyrosine recombinase xerc | C4K41_19390 | Not Available | Negative | 3824652 - 3825548 | 33892.8 |
| duf484 domain-containing protein | C4K41_19395 | Not Available | Negative | 3825545 - 3826252 | 26672.4 |
| diaminopimelate epimerase | C4K41_19400 | Not Available | Negative | 3826249 - 3827073 | 30210.4 |
| hypothetical protein | C4K41_19405 | Not Available | Negative | 3827110 - 3827313 | 7177.59 |
| dknyy family protein | C4K41_19415 | Not Available | Positive | 3828968 - 3830284 | 49797.8 |
| iron donor protein cyay | C4K41_19420 | Not Available | Positive | 3830332 - 3830652 | 12213.0 |
| adenylate cyclase | C4K41_19425 | Not Available | Negative | 3830692 - 3833238 | 97705.5 |
| hypothetical protein | C4K41_19430 | Not Available | Positive | 3833266 - 3833472 | 7971.76 |
| hydroxymethylbilane synthase | C4K41_19435 | Not Available | Positive | 3833625 - 3834566 | 33824.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





